{ "_id": "6ad32b1490c8bbdf41a5141e", "Package": "baskwrap", "Title": "Wrapper Package for Several Basket Trial R Packages", "Version": "1.0.3", "Authors@R": "person(\"Lukas D\", \"Sauer\", , \"sauer@imbi.uni-heidelberg.de\",\nrole = c(\"aut\", \"cre\"),\ncomment = c(ORCID = \"https://orcid.org/0000-0002-1340-9994\"))", "Description": "A simple interface to switch between two methods for\ncalculating basket trial characteristics, numerical integration\n(\"exact\") and Monte Carlo simulation (\"simulated\") for the\nbasket trial design by Fujikawa et al. 2020\n. The exact implementation is from\nthe 'baskexact' package, see Baumann (2024)\n. The simulated implementation\nis from the 'basksim' package, which was developed for Baumann\net al. (2024) . The\npackage's syntax is compatible with the 'basksim' syntax and\neasily extendable.", "License": "MIT + file LICENSE", "Encoding": "UTF-8", "Roxygen": "list(markdown = TRUE)", "RoxygenNote": "7.3.3", "URL": "https://github.com/LukasDSauer/baskwrap", "BugReports": "https://github.com/LukasDSauer/baskwrap/issues", "Config/testthat/edition": "3", "Config/pak/sysreqs": "libgmp3-dev jags", "Repository": "https://lukasdsauer.r-universe.dev", "Date/Publication": "2026-03-20 09:28:14 UTC", "RemoteUrl": "https://github.com/lukasdsauer/baskwrap", "RemoteRef": "HEAD", "RemoteSha": "60835efed163dce0395f4fd00dfcda8aa35b6c8b", "NeedsCompilation": "no", "Packaged": { "Date": "2026-10-17 07:55:35 UTC", "User": "root" }, "Author": "Lukas D Sauer [aut, cre] (ORCID:\n)", "Maintainer": "Lukas D Sauer ", "_user": "lukasdsauer", "_type": "src", "_file": "baskwrap_1.0.3.tar.gz", "_fileid": "https://r2.ropensci.org/99723b9ca1630c837817a90f813d50c8643ab03e21914b69ae0ba4af68977116", "_filesize": 423632, "_sha256": "99723b9ca1630c837817a90f813d50c8643ab03e21914b69ae0ba4af68977116", "_expires": "2027-01-25T08:00:18.000Z", "_created": "2026-10-17T07:55:35.000Z", "_published": "2026-10-17T08:00:20.231Z", "_buildurl": "https://github.com/r-universe/lukasdsauer/actions/runs/39015263313", "_status": "success", "_host": "GitHub-Actions", "_jobs": [ { "job": 117346558038, "time": 200, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "12094716564" }, { "job": 117346558087, "time": 173, "config": "linux-release-x86_64", "r": "4.6.1", "check": "OK", "artifact": "12094975284" }, { "job": 117346558045, "time": 188, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "OK", "artifact": "12094661901" }, { "job": 117346558040, "time": 235, "config": "macos-release-arm64", "r": "4.6.1", "check": "OK", "artifact": "12094930300" }, { "job": 117346020608, "time": 174, "config": "source", "r": "4.6.1", "check": "OK", "artifact": "12094617252" }, { "job": 117346585131, "time": 89, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "12094134981" }, { "job": 117346558059, "time": 178, "config": "windows-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "12094304664" }, { "job": 117346558052, "time": 173, "config": "windows-oldrel-x86_64", "r": "4.5.3", "check": "OK", "artifact": "12095025586" }, { "job": 117346589462, "time": 155, "config": "windows-release-x86_64", "r": "4.6.1", "check": "OK", "artifact": "12094473858" } ], "_upstream": "https://github.com/lukasdsauer/baskwrap", "_commit": { "id": "60835efed163dce0395f4fd00dfcda8aa35b6c8b", "author": "Lukas D Sauer ", "committer": "Lukas D Sauer ", "message": "CRAN badge\n", "time": 1773998894 }, "_maintainer": { "name": "Lukas D Sauer", "email": "sauer@imbi.uni-heidelberg.de", "login": "lukasdsauer", "linkedin": "in/lukas-d-sauer-2288001b0", "orcid": "0000-0002-1340-9994", "description": "Biometrician at the @imbi-heidelberg, University Hospital of Heidelberg, Germany.", "uuid": 10990295 }, "_distro": "resolute", "_registered": true, "_dependencies": [ { "package": "R", "version": ">= 3.5.0", "role": "Depends" }, { "package": "basksim", "version": ">= 0.1.0", "role": "Imports" }, { "package": "baskexact", "role": "Imports" }, { "package": "testthat", "version": ">= 3.0.0", "role": "Suggests" }, { "package": "here", "role": "Suggests" }, { "package": "reticulate", "role": "Suggests" }, { "package": "ggplot2", "role": "Suggests" } ], "_owner": "lukasdsauer", "_selfowned": true, "_usedby": 1, "_updates": [ { "week": "2026-10", "n": 6 }, { "week": "2026-11", "n": 2 }, { "week": "2026-12", "n": 1 } ], "_tags": [ { "name": "v1.0.3", "date": "2026-03-13" } ], "_topics": [ "basket-trials", "bayesian-statistics", "clinical-trials", "jags", "cpp" ], "_stars": 1, "_contributors": [ { "user": "lukasdsauer", "count": 70, "uuid": 10990295 } ], "_userbio": { "uuid": 10990295, "type": "user", "name": "Lukas D. Sauer", "followers": 12, "description": "Biometrician at the @imbi-heidelberg, University Hospital of Heidelberg, Germany." }, "_downloads": { "count": 335, "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/baskwrap" }, "_devurl": "https://github.com/lukasdsauer/baskwrap", "_searchresults": 1, "_rbuild": "4.6.1", "_assets": [ "extra/baskwrap.html", "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/manual.pdf", "extra/readme.html", "extra/readme.md", "LICENSE" ], "_homeurl": "https://github.com/lukasdsauer/baskwrap", "_realowner": "lukasdsauer", "_cranurl": true, "_releases": [ { "version": "1.0.3", "date": "2026-03-19" } ], "_exports": [ "basket_test", "check_mon_between", "check_mon_within", "convert_to_baskexact", "convert_to_basksim", "convert_to_fujikawa_x", "ecd", "estim", "get_details", "get_scenarios", "is_baskexact_design", "opt_design", "plot_weights", "pow", "set_backend", "setup_fujikawa_x", "toer", "weights_fujikawa_tuned", "weights_hld", "weights_hld_vanilla", "weights_jsd", "weights_jsd_vanilla" ], "_help": [ { "page": "basket_test", "title": "Test for the results of a basket trial", "topics": [ "basket_test" ] }, { "page": "basket_test.fujikawa_x", "title": "Test for the results of a basket trial", "topics": [ "basket_test.fujikawa_x" ] }, { "page": "check_mon_within", "title": "Check Within- And Between-Trial Monotonicity Of A Basket Trial Design", "topics": [ "check_mon_between", "check_mon_between.fujikawa_x", "check_mon_within", "check_mon_within.fujikawa_x" ] }, { "page": "convert_to_fujikawa_x", "title": "Class conversions", "topics": [ "convert_to_baskexact", "convert_to_basksim", "convert_to_fujikawa_x" ] }, { "page": "ecd", "title": "Calculate the Expected Number of Correct Decisions for a Basket Trial Design", "topics": [ "ecd", "ecd.default" ] }, { "page": "ecd.fujikawa_x", "title": "Calculate the Expected Number of Correct Decisions for Fujikawa et al.'s Basket Trial Design", "topics": [ "ecd.fujikawa_x" ] }, { "page": "estim", "title": "Calculate the Posterior Mean and Mean Squared Error for a Basket Trial Design", "topics": [ "estim", "estim.default", "estim.fujikawa_x" ] }, { "page": "get_details.fujikawa_x", "title": "Get Details of a Basket Trial Simulation with Fujikawa's Design", "topics": [ "get_details.fujikawa_x" ] }, { "page": "get_scenarios", "title": "Generate a matrix of default outcome scenarios", "topics": [ "get_scenarios" ] }, { "page": "is_baskexact_design", "title": "Check whether an R object is a 'baskexact' design.", "topics": [ "is_baskexact_design" ] }, { "page": "opt_design", "title": "Optimize a Basket Trial Design", "topics": [ "opt_design", "opt_design.default" ] }, { "page": "opt_design.fujikawa_x", "title": "Optimize Fujikawa et al.'s Basket Trial Design", "topics": [ "opt_design.fujikawa_x" ] }, { "page": "plot_weights", "title": "Plot Weights of a Basket Trial Design", "topics": [ "plot_weights" ] }, { "page": "plot_weights.fujikawa_x", "title": "Plot Weight Functions of Fujikawa et al.'s Basket Trial Design", "topics": [ "plot_weights.fujikawa_x" ] }, { "page": "pow", "title": "Calculate the Power for a Basket Trial Design", "topics": [ "pow", "pow.default" ] }, { "page": "pow.fujikawa_x", "title": "Calculate the Power for a Fujikawa et al.'s Basket Trial Design", "topics": [ "pow.fujikawa_x" ] }, { "page": "set_backend", "title": "Set the backend of a Fujikawa design", "topics": [ "set_backend" ] }, { "page": "set_design_exact", "title": "Set baskexact design object", "topics": [ "set_design_exact" ] }, { "page": "setup_fujikawa_x", "title": "Set up a Fujikawa design object with flexible backend", "topics": [ "setup_fujikawa_x" ] }, { "page": "toer", "title": "Calculate the Type 1 Error Rate for a Basket Trial Design", "topics": [ "toer", "toer.default" ] }, { "page": "toer.fujikawa_x", "title": "Calculate the Type 1 Error Rate for a Fujikawa et al.'s Basket Trial Design", "topics": [ "toer.fujikawa_x" ] }, { "page": "weights_jsd", "title": "Further weight functions", "topics": [ "weights_fujikawa_tuned", "weights_hld", "weights_hld_vanilla", "weights_jsd", "weights_jsd_vanilla" ] } ], "_pkglogo": "https://github.com/lukasdsauer/baskwrap/raw/HEAD/man/figures/logo.png", "_readme": "https://github.com/lukasdsauer/baskwrap/raw/HEAD/README.md", "_rundeps": [ "arrangements", "backports", "baskexact", "basksim", "bhmbasket", "checkmate", "cli", "coda", "codetools", "cpp11", "digest", "doFuture", "doRNG", "extraDistr", "farver", "foreach", "future", "future.apply", "ggplot2", "globals", "glue", "gmp", "gtable", "HDInterval", "isoband", "iterators", "labeling", "lattice", "lifecycle", "listenv", "magrittr", "parallelly", "progressr", "purrr", "R6", "RColorBrewer", "Rcpp", "RcppArmadillo", "rjags", "rlang", "rngtools", "S7", "scales", "vctrs", "viridisLite", "withr" ], "_sysdeps": [ { "shlib": "libjags", "package": "jags", "headers": "jags", "source": "jags", "version": "4.3.2-2.2604.0", "name": "jags", "homepage": "https://mcmc-jags.sourceforge.io", "description": "Just Another Gibbs Sampler for Bayesian MCMC - binary" }, { "shlib": "libstdc++", "package": "libstdc++6", "source": "gcc", "version": "16-20260322-1ubuntu1", "name": "c++", "homepage": "http://gcc.gnu.org/", "description": "GNU Standard C++ Library v3" } ], "_score": 3.6532125137753435, "_indexed": true, "_nocasepkg": "baskwrap", "_universes": [ "lukasdsauer" ], "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "1.0.3", "date": "2026-10-17T07:57:36.000Z", "distro": "resolute", "commit": "60835efed163dce0395f4fd00dfcda8aa35b6c8b", "fileid": "https://r2.ropensci.org/1efedaba84225177b9414a35a8c4d9b6e9d92afaaf8cacb15aaa74e606c63474", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/lukasdsauer/actions/runs/39015263313" }, { "r": "4.6.1", "os": "linux", "version": "1.0.3", "date": "2026-10-17T07:57:32.000Z", "distro": "resolute", "commit": "60835efed163dce0395f4fd00dfcda8aa35b6c8b", "fileid": "https://r2.ropensci.org/3f1f388d58f19325de9d9dd0b1dd6f868a4abb66a795419c7b2a82d0043ed313", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/lukasdsauer/actions/runs/39015263313" }, { "r": "4.5.3", "os": "mac", "version": "1.0.3", "date": "2026-10-17T07:57:42.000Z", "commit": "60835efed163dce0395f4fd00dfcda8aa35b6c8b", "fileid": "https://r2.ropensci.org/4ed39e3cd97c49755c60e4aff95892ec04ea2d9e47f8966a9eef1cc8d151291f", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/lukasdsauer/actions/runs/39015263313" }, { "r": "4.6.1", "os": "mac", "version": "1.0.3", "date": "2026-10-17T07:58:08.000Z", "commit": "60835efed163dce0395f4fd00dfcda8aa35b6c8b", "fileid": "https://r2.ropensci.org/58c3af1065d7ba9d2b6e29762584ee117af4f4f5efa483b931f8053d55670141", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/lukasdsauer/actions/runs/39015263313" }, { "r": "4.6.0", "os": "wasm", "version": "1.0.3", "date": "2026-10-17T07:57:30.000Z", "commit": "60835efed163dce0395f4fd00dfcda8aa35b6c8b", "fileid": "https://r2.ropensci.org/57d8313b7e20d325fd3d18c8ea7fc37ec7e2027f4eed21cf87acfc2def62c1b6", "status": "success", "buildurl": "https://github.com/r-universe/lukasdsauer/actions/runs/39015263313" }, { "r": "4.7.0", "os": "win", "version": "1.0.3", "date": "2026-10-17T07:56:46.000Z", "commit": "60835efed163dce0395f4fd00dfcda8aa35b6c8b", "fileid": "https://r2.ropensci.org/dbfca459ac91630b94011dd6cca610ea2cef9173633804e13532599a1ca5678f", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/lukasdsauer/actions/runs/39015263313" }, { "r": "4.5.3", "os": "win", "version": "1.0.3", "date": "2026-10-17T07:56:43.000Z", "commit": "60835efed163dce0395f4fd00dfcda8aa35b6c8b", "fileid": "https://r2.ropensci.org/9dd02390d9e8dc986c1548335f7f195c2ac5f6175d69906d8cc6908130e6078b", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/lukasdsauer/actions/runs/39015263313" }, { "r": "4.6.1", "os": "win", "version": "1.0.3", "date": "2026-10-17T07:56:56.000Z", "commit": "60835efed163dce0395f4fd00dfcda8aa35b6c8b", "fileid": "https://r2.ropensci.org/c47ff1ac28fca507c7ebf6f0cbf9e49b4e0b0df2e14a05a1deae9c985f1f252c", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/lukasdsauer/actions/runs/39015263313" } ] }